Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.cutin and suberin.export.wax lipid exporter (CER5)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 1 CH_acertr_336 2 2 0.000070497
Aquilegia oxysepala CHR01 1 CH_aox_174 2 2 0.0000801989
Camellia sinensis var. sinensis Chr11 1 CH_camsi_211 3 4 0.0000000126159
Cannabis sativa NC_044375.1 1 CH_cansat_234 2 2 0.0000656642
Corylus avellana 6 1 CH_cav_403 2 4 0.000459982
Citrus clementina scaffold_2 1 CH_ccl_325 2 2 0.0000820311
Carpinus fangiana Cfa04 1 CH_cfa_237 2 2 0.0000757346
Carya illinoinensis Chr14 1 CH_cil_491 2 2 0.000371897
Cucumis melo chr05 1 CH_cme_193 2 2 0.0000667111
Capsella rubella scaffold_1 1 CH_cru_398 2 3 0.000657999
Cucumis sativus L. chr6 1 CH_csa_214 2 2 0.0000834759
Daucus carota DCARv2_Chr9 1 CH_dca_315 2 2 0.000191333
Erythranthe guttata scaffold_4 1 CH_egut_440 2 2 0.000436888
Fragaria x ananassa Fvb3-4 1 CH_fan_498 2 3 0.000333058
Fragaria vesca Fvb3 1 CH_fve_472 2 6 0.000883548
Glycine max Gm12 1 CH_gma_458 2 2 0.000227734
Glycine max Gm11 1 CH_gma_459 2 2 0.000227734
Helianthus annuus HanXRQChr13 1 CH_han_514 2 2 0.000115929
Lactuca sativa Lsat_1_v8_lg_6 1 CH_lsa_404 2 2 0.000154202
Malus domestica Chr03 1 CH_mdo_494 2 2 0.000113763
Medicago truncatula chr4 1 CH_mtr_249 3 5 0.0000000253208
Nelumbo nucifera chr7 1 CH_nnu_138 3 8 0.00000319277
Nelumbo nucifera chr2 1 CH_nnu_139 3 8 0.00000319277
Punica granatum NC_045132.1 1 CH_pgr_219 2 3 0.0000750356
Prunus persica Pp04 1 CH_ppe_442 2 4 0.000447544
Pisum sativum chr7LG7 1 CH_psa_319 2 4 0.000312965
Populus trichocarpa Chr09 1 CH_ptr_390 2 2 0.0001734
Phaseolus vulgaris Chr11 1 CH_pvu_102 3 3 0.00000000809765
Quercus lobata 1 1 CH_qlo_682 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_650 2 4 0.000239182
Striga asiatica scaffold29 1 CH_sas_65 2 3 0.0000625371
Salix brachista GWHAAZH00000009 1 CH_sbr_296 2 2 0.000189042
Solanum lycopersicum SL4.0ch11 1 CH_sly_345 2 2 0.0000586941
Schrenkiella parvula ch1-2 1 CH_spa_229 2 2 0.000236202
Theobroma cacao Chromosome_9 1 CH_tca_295 2 2 0.0000732386
Tripterygium wilfordii NC_052254.1 1 CH_twi_269 2 3 0.000501733
Vigna mungo CM024076.1 1 CH_vmu_215 2 2 0.0000646141
Vitis vinifera chr6 1 CH_vvi_287 2 2 0.000076063
Acer truncatum chr3 2 CH_acertr_336 2 2 0.000070497
Aquilegia oxysepala CHR01 2 CH_aox_174 2 2 0.0000801989
Camellia sinensis var. sinensis Chr11 2 CH_camsi_211 3 4 0.0000000126159
Cannabis sativa NC_044375.1 2 CH_cansat_234 2 2 0.0000656642
Corylus avellana 6 2 CH_cav_403 2 4 0.000459982
Citrus clementina scaffold_2 2 CH_ccl_325 2 2 0.0000820311
Carpinus fangiana Cfa04 2 CH_cfa_237 2 2 0.0000757346
Carya illinoinensis Chr14 2 CH_cil_491 2 2 0.000371897
Cucumis melo chr05 2 CH_cme_193 2 2 0.0000667111
Capsella rubella scaffold_1 2 CH_cru_398 2 3 0.000657999
Cucumis sativus L. chr6 2 CH_csa_214 2 2 0.0000834759
Daucus carota DCARv2_Chr9 2 CH_dca_315 2 2 0.000191333
Eucalyptus grandis Chr10 2 CH_egr_697 2 2 0.0000585274
Erythranthe guttata scaffold_4 2 CH_egut_440 2 2 0.000436888
Fragaria x ananassa Fvb3-4 2 CH_fan_498 2 3 0.000333058
Fragaria vesca Fvb3 2 CH_fve_472 2 6 0.000883548
Glycine max Gm12 2 CH_gma_458 2 2 0.000227734
Glycine max Gm11 2 CH_gma_459 2 2 0.000227734
Helianthus annuus HanXRQChr13 2 CH_han_514 2 2 0.000115929
Lotus japonicus chr3 2 CH_lja_278 2 2 0.0000715077
Lactuca sativa Lsat_1_v8_lg_6 2 CH_lsa_404 2 2 0.000154202
Malus domestica Chr03 2 CH_mdo_494 2 2 0.000113763
Nelumbo nucifera chr7 2 CH_nnu_138 3 8 0.00000319277
Nelumbo nucifera chr2 2 CH_nnu_139 3 8 0.00000319277
Punica granatum NC_045132.1 2 CH_pgr_219 2 3 0.0000750356
Prunus persica Pp04 2 CH_ppe_442 2 4 0.000447544
Pisum sativum chr7LG7 2 CH_psa_319 2 4 0.000312965
Populus trichocarpa Chr09 2 CH_ptr_390 2 2 0.0001734
Phaseolus vulgaris Chr11 2 CH_pvu_102 3 3 0.00000000809765
Quercus lobata 1 2 CH_qlo_682 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_650 2 4 0.000239182
Striga asiatica scaffold29 2 CH_sas_65 2 3 0.0000625371
Salix brachista GWHAAZH00000009 2 CH_sbr_296 2 2 0.000189042
Solanum lycopersicum SL4.0ch11 2 CH_sly_345 2 2 0.0000586941
Schrenkiella parvula ch1-2 2 CH_spa_229 2 2 0.000236202
Theobroma cacao Chromosome_9 2 CH_tca_295 2 2 0.0000732386
Tripterygium wilfordii NC_052254.1 2 CH_twi_269 2 3 0.000501733
Vigna mungo CM024076.1 2 CH_vmu_215 2 2 0.0000646141
Vitis vinifera chr6 2 CH_vvi_287 2 2 0.000076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001