Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.cutin and suberin.alkyl-hydrocinnamate biosynthesis.feruroyl-coenzyme A transferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 1 CH_amhyb_242 2 2 0.000505051
Cannabis sativa NC_044379.1 1 CH_cansat_306 2 2 0.000196993
Carpinus fangiana Cfa08 1 CH_cfa_285 2 3 0.000227195
Carya illinoinensis Chr11 1 CH_cil_105 4 4 0.00000000000357228
Davidia involucrata GWHABJS00000001 1 CH_din_533 2 3 0.000900173
Eucalyptus grandis Chr10 1 CH_egr_143 6 6 8.38725e-16
Eucalyptus grandis Chr08 1 CH_egr_186 6 9 0.0000000000000703672
Eucalyptus grandis Chr01 1 CH_egr_235 5 6 0.0000000000107421
Lonicera japonica GWHAAZE00000001 1 CH_lonja_180 4 10 0.0000000283892
Papaver somniferum NC_039362.1 1 CH_pso_371 3 5 0.0000134717
Papaver somniferum NC_039359.1 1 CH_pso_397 3 6 0.0000269385
Papaver somniferum NC_039361.1 1 CH_pso_503 3 10 0.000161515
Rhododendron simsii chr02 1 CH_rsi_209 3 3 0.000000349805
Rhododendron simsii chr09 1 CH_rsi_306 3 9 0.0000293566
Sechium edule LG08 1 CH_sed_60 3 3 0.00000000763478
Selenicereus undatus Scaffold_33678 1 CH_sun_253 2 2 0.000435983
Trochodendron aralioides group13 1 CH_tar_528 2 2 0.000600366
Vanilla planifolia CM028153.1 1 CH_vpl_186 2 2 0.000073888
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 2 CH_amhyb_242 2 2 0.000505051
Cannabis sativa NC_044379.1 2 CH_cansat_306 2 2 0.000196993
Carpinus fangiana Cfa08 2 CH_cfa_285 2 3 0.000227195
Carya illinoinensis Chr11 2 CH_cil_105 4 4 0.00000000000357228
Davidia involucrata GWHABJS00000001 2 CH_din_533 2 3 0.000900173
Eucalyptus grandis Chr10 2 CH_egr_143 6 6 8.38725e-16
Eucalyptus grandis Chr08 2 CH_egr_186 6 9 0.0000000000000703672
Eucalyptus grandis Chr01 2 CH_egr_235 5 6 0.0000000000107421
Lonicera japonica GWHAAZE00000001 2 CH_lonja_180 4 10 0.0000000283892
Papaver somniferum NC_039362.1 2 CH_pso_371 3 5 0.0000134717
Papaver somniferum NC_039359.1 2 CH_pso_397 3 6 0.0000269385
Papaver somniferum NC_039361.1 2 CH_pso_503 3 10 0.000161515
Rhododendron simsii chr02 2 CH_rsi_209 3 3 0.000000349805
Rhododendron simsii chr09 2 CH_rsi_306 3 9 0.0000293566
Sechium edule LG08 2 CH_sed_60 3 3 0.00000000763478
Selenicereus undatus Scaffold_33678 2 CH_sun_253 2 2 0.000435983
Trochodendron aralioides group13 2 CH_tar_528 2 2 0.000600366
Vanilla planifolia CM028153.1 2 CH_vpl_186 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001