Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.cutin and suberin.cuticular lipid formation.fatty acyl in-chain hydroxylase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_3 1 CH_aly_372 2 2 0.000396027
Arabidopsis thaliana Chr3 1 CH_ath_315 2 2 0.000171895
Brassica carinata ChrC06 1 CH_bca_718 2 2 0.000128259
Cardamine hirsuta Chr6 1 CH_chi_399 2 3 0.000622048
Capsella rubella scaffold_6 1 CH_cru_336 2 2 0.000219346
Eutrema salsugineum scaffold_13 1 CH_esa_259 2 2 0.00022845
Magnolia biondii Chr17 1 CH_mbi_666 2 4 0.000874119
Quercus lobata 4 1 CH_qlo_681 2 2 0.0000516289
Salix brachista GWHAAZH00000008 1 CH_sbr_234 2 2 0.000063014
Schrenkiella parvula ch3-1 1 CH_spa_228 2 2 0.000236202
Arabidopsis lyrata scaffold_3 2 CH_aly_372 2 2 0.000396027
Arabidopsis thaliana Chr3 2 CH_ath_315 2 2 0.000171895
Brassica carinata ChrC06 2 CH_bca_718 2 2 0.000128259
Cardamine hirsuta Chr6 2 CH_chi_399 2 3 0.000622048
Capsella rubella scaffold_6 2 CH_cru_336 2 2 0.000219346
Eutrema salsugineum scaffold_13 2 CH_esa_259 2 2 0.00022845
Magnolia biondii Chr17 2 CH_mbi_666 2 4 0.000874119
Quercus lobata 4 2 CH_qlo_681 2 2 0.0000516289
Salix brachista GWHAAZH00000008 2 CH_sbr_234 2 2 0.000063014
Schrenkiella parvula ch3-1 2 CH_spa_228 2 2 0.000236202

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001