Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.cutin and suberin

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrus clementina scaffold_4 1 CH_ccl_260 4 9 0.0000403044
Durio zibethinus NW_019168481.1 1 CH_dzi_300 3 3 0.000353613
Glycine max Gm03 1 CH_gma_291 5 17 0.0000144756
Citrus clementina scaffold_4 2 CH_ccl_260 4 9 0.0000403044
Durio zibethinus NW_019168481.1 2 CH_dzi_300 3 3 0.000353613
Glycine max Gm03 2 CH_gma_291 5 17 0.0000144756

Available child term results

Ontology identifier Description Number of clusters
21.9.1 Cell wall organisation.cutin and suberin.cuticular lipid formation 9
21.9.1.1 Cell wall organisation.cutin and suberin.cuticular lipid formation.fatty acyl omega-hydroxylase (CYP86A) 4
21.9.1.2 Cell wall organisation.cutin and suberin.cuticular lipid formation.fatty acyl in-chain hydroxylase 20
21.9.1.3 Cell wall organisation.cutin and suberin.cuticular lipid formation.very-long-chain fatty acyl omega-hydroxylase (CYP86B) 1
21.9.1.5.1 Cell wall organisation.cutin and suberin.cuticular lipid formation.monoacylglyceryl ester monomer biosynthesis.cutin sn-glycerol-3-phosphate acyltransferase 4
21.9.1.5.2 Cell wall organisation.cutin and suberin.cuticular lipid formation.monoacylglyceryl ester monomer biosynthesis.suberin sn-glycerol-3-phosphate acyltransferase 6
21.9.1.6.1 Cell wall organisation.cutin and suberin.cuticular lipid formation.acyl-reduction pathway.fatty acyl CoA reductase 128
21.9.1.6.2 Cell wall organisation.cutin and suberin.cuticular lipid formation.acyl-reduction pathway.wax ester synthase and diacylglycerol acyltransferase 90
21.9.1.7.1.1 Cell wall organisation.cutin and suberin.cuticular lipid formation.alkane-forming pathway.CER1-CER3 alkane-forming complex.aldehyde decarbonylase component CER1 110
21.9.1.7.1.2 Cell wall organisation.cutin and suberin.cuticular lipid formation.alkane-forming pathway.CER1-CER3 alkane-forming complex.aldehyde-generating component CER3 11
21.9.1.7.1.3.1 Cell wall organisation.cutin and suberin.cuticular lipid formation.alkane-forming pathway.CER1-CER3 alkane-forming complex.electron supply module.NADH:cytochrome-b5 reductase (CBR) 4
21.9.1.7.1.3.2 Cell wall organisation.cutin and suberin.cuticular lipid formation.alkane-forming pathway.CER1-CER3 alkane-forming complex.electron supply module.electron shuttle hemoprotein (Cyt-b5) 12
21.9.1.7.2 Cell wall organisation.cutin and suberin.cuticular lipid formation.alkane-forming pathway.mid-chain alkane hydroxylase (MAH1) 16
21.9.2.1 Cell wall organisation.cutin and suberin.alkyl-hydrocinnamate biosynthesis.feruroyl-coenzyme A transferase 36
21.9.3.1 Cell wall organisation.cutin and suberin.biosynthesis regulation.transcription factor (SHN) 10
21.9.4.1 Cell wall organisation.cutin and suberin.export.suberin/cutin lipid exporter (DSO) 2
21.9.4.2 Cell wall organisation.cutin and suberin.export.wax lipid exporter (CER5) 77
21.9.5 Cell wall organisation.cutin and suberin.cutin polyester biosynthesis 2
21.9.5.1 Cell wall organisation.cutin and suberin.cutin polyester biosynthesis.lysophospholipase (BDG) 18
21.9.5.2 Cell wall organisation.cutin and suberin.cutin polyester biosynthesis.cutin synthase (CD) 101
21.9.5.3 Cell wall organisation.cutin and suberin.cutin polyester biosynthesis.cutin synthase (DCR) 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001