Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.lignin.monolignol glycosylation and deglycosylation.coniferyl-alcohol glucosyltransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C7 1 CH_bol_355 2 2 0.000326861
Brassica rapa A03 1 CH_bra_327 2 2 0.000429314
Citrus clementina scaffold_7 1 CH_ccl_405 2 2 0.000246093
Durio zibethinus NW_019168470.1 1 CH_dzi_317 2 3 0.000417124
Eucalyptus grandis Chr08 1 CH_egr_207 4 4 0.000000000000601504
Eutrema salsugineum scaffold_16 1 CH_esa_257 2 2 0.00022845
Populus trichocarpa Chr07 1 CH_ptr_155 3 4 0.0000000200451
Salix brachista GWHAAZH00000007 1 CH_sbr_266 2 3 0.000189036
Theobroma cacao Chromosome_1 1 CH_tca_328 2 3 0.000219708
Tripterygium wilfordii NC_052232.1 1 CH_twi_222 2 2 0.000167252
Brassica oleracea C7 2 CH_bol_355 2 2 0.000326861
Brassica rapa A03 2 CH_bra_327 2 2 0.000429314
Citrus clementina scaffold_7 2 CH_ccl_405 2 2 0.000246093
Durio zibethinus NW_019168470.1 2 CH_dzi_317 2 3 0.000417124
Eucalyptus grandis Chr08 2 CH_egr_207 4 4 0.000000000000601504
Eutrema salsugineum scaffold_16 2 CH_esa_257 2 2 0.00022845
Populus trichocarpa Chr07 2 CH_ptr_155 3 4 0.0000000200451
Salix brachista GWHAAZH00000007 2 CH_sbr_266 2 3 0.000189036
Theobroma cacao Chromosome_1 2 CH_tca_328 2 3 0.000219708
Tripterygium wilfordii NC_052232.1 2 CH_twi_222 2 2 0.000167252

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001