Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.lignin.monolignol biosynthesis.Cyt-P450 hydroxylase scaffold protein (MSBP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold1126 1 CH_can_21 6 6 6.06228e-19
Citrullus lanatus CG_Chr08 1 CH_cla_202 2 2 0.000532269
Cucumis melo chr03 1 CH_cme_310 2 2 0.000667111
Cucumis sativus L. chr2 1 CH_csa_327 2 2 0.000834759
Helianthus annuus HanXRQChr08 1 CH_han_467 4 77 0.0000765965
Medicago truncatula chr6 1 CH_mtr_447 3 10 0.000010629
Sequoiadendron giganteum chr5 1 CH_sgi_1244 2 2 0.000292291
Capsicum annuum PGAv.1.6.scaffold1126 2 CH_can_21 6 6 6.06228e-19
Citrullus lanatus CG_Chr08 2 CH_cla_202 2 2 0.000532269
Cucumis melo chr03 2 CH_cme_310 2 2 0.000667111
Cucumis sativus L. chr2 2 CH_csa_327 2 2 0.000834759
Helianthus annuus HanXRQChr08 2 CH_han_467 4 77 0.0000765965
Sequoiadendron giganteum chr5 2 CH_sgi_1244 2 2 0.000292291

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001