Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.pectin.modification and degradation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Eutrema salsugineum scaffold_1 1 CH_esa_209 5 71 0.000166911
Eutrema salsugineum scaffold_1 2 CH_esa_209 5 71 0.000166911

Available child term results

Ontology identifier Description Number of clusters
21.3.5.1 Cell wall organisation.pectin.modification and degradation.polygalacturonase activities 2
21.3.5.1.1 Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (QRT2) 20
21.3.5.1.2 Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (QRT3) 104
21.3.5.1.3 Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (PGX1) 2
21.3.5.1.4 Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.non-catalytic polygalacturonase regulator 55
21.3.5.2 Cell wall organisation.pectin.modification and degradation.pectate lyase 60
21.3.5.3 Cell wall organisation.pectin.modification and degradation.pectin lyase 10
21.3.5.4 Cell wall organisation.pectin.modification and degradation.pectin acetylesterase 60

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001