Functional clusters
Information
- Type MapMan
- Description Cell wall organisation.pectin.rhamnogalacturonan II.biosynthesis.2-keto-3-deoxymanno-octulosonic acid (KDO) biosynthesis.D-arabinose-5-phosphate isomerase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_228 | 1 | CH_aag_160 | 2 | 2 | 0.000481541 |
| Papaver somniferum | NC_039358.1 | 1 | CH_pso_168 | 3 | 3 | 0.00000000760956 |
| Sequoiadendron giganteum | chr8 | 1 | CH_sgi_385 | 3 | 3 | 0.00000000355983 |
| Anthoceros agrestis | Sc2ySwM_228 | 2 | CH_aag_160 | 2 | 2 | 0.000481541 |
| Papaver somniferum | NC_039358.1 | 2 | CH_pso_168 | 3 | 3 | 0.00000000760956 |
| Sequoiadendron giganteum | chr8 | 2 | CH_sgi_385 | 3 | 3 | 0.00000000355983 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |