Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.hemicellulose.arabinogalactan.modification.beta-1,3-galactosidase (GH43)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrullus lanatus CG_Chr02 1 CH_cla_120 2 2 0.0000887115
Cucumis melo chr11 1 CH_cme_220 2 3 0.000200127
Carica papaya supercontig_6 1 CH_cpa_205 2 2 0.0000950661
Helianthus annuus HanXRQChr12 1 CH_han_432 2 2 0.0000386429
Malus domestica Chr02 1 CH_mdo_555 2 2 0.000227527
Malus domestica Chr15 1 CH_mdo_556 2 2 0.000227527
Salvia bowleyana GWHASIU00000002 1 CH_sbo_336 2 2 0.000136494
Solanum lycopersicum SL4.0ch03 1 CH_sly_475 2 2 0.000352164
Citrullus lanatus CG_Chr02 2 CH_cla_120 2 2 0.0000887115
Cucumis melo chr11 2 CH_cme_220 2 3 0.000200127
Carica papaya supercontig_6 2 CH_cpa_205 2 2 0.0000950661
Helianthus annuus HanXRQChr12 2 CH_han_432 2 2 0.0000386429
Malus domestica Chr02 2 CH_mdo_555 2 2 0.000227527
Malus domestica Chr15 2 CH_mdo_556 2 2 0.000227527
Salvia bowleyana GWHASIU00000002 2 CH_sbo_336 2 2 0.000136494
Solanum lycopersicum SL4.0ch03 2 CH_sly_475 2 2 0.000352164

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001