Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.hemicellulose.xyloglucan.biosynthesis.galacturonosyltransferase (XUT1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_368 1 CH_aag_154 2 4 0.000481502
Aethionema arabicum LG-2 1 CH_aar_202 2 2 0.000273698
Amborella trichopoda AmTr_v1.0_scaffold00001 1 CH_atr_181 2 2 0.0000794407
Camellia sinensis var. sinensis Chr14 1 CH_camsi_700 2 4 0.000275116
Cardamine hirsuta Chr7 1 CH_chi_295 2 2 0.000207361
Chenopodium quinoa C_Quinoa_Scaffold_3489 1 CH_cqu_421 2 2 0.000284293
Eutrema salsugineum scaffold_14 1 CH_esa_242 2 2 0.00022845
Medicago truncatula chr5 1 CH_mtr_516 2 2 0.0000410863
Punica granatum NC_045127.1 1 CH_pgr_205 2 2 0.0000750356
Schrenkiella parvula un0010 1 CH_spa_287 2 2 0.00078734
Schrenkiella parvula ch7-1 1 CH_spa_288 2 2 0.00078734
Anthoceros agrestis Sc2ySwM_368 2 CH_aag_154 2 4 0.000481502
Aethionema arabicum LG-2 2 CH_aar_202 2 2 0.000273698
Amborella trichopoda AmTr_v1.0_scaffold00001 2 CH_atr_181 2 2 0.0000794407
Camellia sinensis var. sinensis Chr14 2 CH_camsi_700 2 4 0.000275116
Cardamine hirsuta Chr7 2 CH_chi_295 2 2 0.000207361
Chenopodium quinoa C_Quinoa_Scaffold_3489 2 CH_cqu_421 2 2 0.000284293
Eutrema salsugineum scaffold_14 2 CH_esa_242 2 2 0.00022845
Punica granatum NC_045127.1 2 CH_pgr_205 2 2 0.0000750356
Schrenkiella parvula un0010 2 CH_spa_287 2 2 0.00078734
Schrenkiella parvula ch7-1 2 CH_spa_288 2 2 0.00078734

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001