Functional clusters
Information
- Type MapMan
- Description Cell wall organisation.hemicellulose.xyloglucan.biosynthesis
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Quercus lobata | 3 | 1 | CH_qlo_370 | 5 | 29 | 0.0000000274725 |
| Quercus lobata | 3 | 2 | CH_qlo_370 | 5 | 29 | 0.0000000274725 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 21.2.1.1.1 | Cell wall organisation.hemicellulose.xyloglucan.biosynthesis.1,4-beta-glucan synthase (CSLC) | 2 |
| 21.2.1.1.2 | Cell wall organisation.hemicellulose.xyloglucan.biosynthesis.1,6-alpha-xylosyltransferase (XXT) | 12 |
| 21.2.1.1.3 | Cell wall organisation.hemicellulose.xyloglucan.biosynthesis.1,2-beta-galactosyltransferase (MUR3) | 2 |
| 21.2.1.1.4 | Cell wall organisation.hemicellulose.xyloglucan.biosynthesis.1,2-alpha-fucosyltransferase (FUT) | 101 |
| 21.2.1.1.5 | Cell wall organisation.hemicellulose.xyloglucan.biosynthesis.galacturonosyltransferase (XUT1) | 21 |
| 21.2.1.1.6 | Cell wall organisation.hemicellulose.xyloglucan.biosynthesis.galactosyltransferase (XLT2) | 16 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |