Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.cellulose.cellulose-hemicellulose network assembly.regulatory protein (KOBITO)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 1 CH_amhyb_48 3 4 0.0000004251
Beta vulgaris Chr3_EL10_PGA_scaffold7 1 CH_bvu_102 3 5 0.000000411226
Davidia involucrata GWHABJS00000021 1 CH_din_429 2 2 0.000300075
Hydrangea macrophylla Hma1.2p1_0056F.1 1 CH_hma_275 2 2 0.000111086
Sequoiadendron giganteum chr8 1 CH_sgi_915 2 2 0.0000487151
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 2 CH_amhyb_48 3 4 0.0000004251
Beta vulgaris Chr3_EL10_PGA_scaffold7 2 CH_bvu_102 3 5 0.000000411226
Davidia involucrata GWHABJS00000021 2 CH_din_429 2 2 0.000300075
Hydrangea macrophylla Hma1.2p1_0056F.1 2 CH_hma_275 2 2 0.000111086
Sequoiadendron giganteum chr8 2 CH_sgi_915 2 2 0.0000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001