Functional clusters
Information
- Type MapMan
- Description Cytoskeleton organisation.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.cofactor (TFC-E)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Citrullus lanatus | CG_Chr03 | 1 | CH_cla_35 | 3 | 4 | 0.0000000472183 |
Glycine max | Gm15 | 1 | CH_gma_376 | 2 | 2 | 0.000113867 |
Nicotiana tabacum | Nitab4.5_0000213 | 1 | CH_nta_100 | 2 | 2 | 0.000109727 |
Petunia axillaris | Peaxi162Scf00078 | 1 | CH_pax_197 | 2 | 2 | 0.0000703556 |
Salix brachista | GWHAAZH00000015 | 1 | CH_sbr_360 | 2 | 3 | 0.000567096 |
Solanum lycopersicum | SL4.0ch11 | 1 | CH_sly_326 | 2 | 2 | 0.0000586941 |
Citrullus lanatus | CG_Chr03 | 2 | CH_cla_35 | 3 | 4 | 0.0000000472183 |
Glycine max | Gm15 | 2 | CH_gma_376 | 2 | 2 | 0.000113867 |
Nicotiana tabacum | Nitab4.5_0000213 | 2 | CH_nta_100 | 2 | 2 | 0.000109727 |
Petunia axillaris | Peaxi162Scf00078 | 2 | CH_pax_197 | 2 | 2 | 0.0000703556 |
Salix brachista | GWHAAZH00000015 | 2 | CH_sbr_360 | 2 | 3 | 0.000567096 |
Solanum lycopersicum | SL4.0ch11 | 2 | CH_sly_326 | 2 | 2 | 0.0000586941 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |