Functional clusters

Information

  • Type MapMan
  • Description Cytoskeleton organisation.actin and tubulin folding.CCT chaperonin folding complex.subunit zeta (CCT6)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00002 1 CH_atr_300 2 2 0.000476644
Brassica carinata ChrB01 1 CH_bca_941 2 2 0.000448905
Camellia sinensis var. sinensis Chr1 1 CH_camsi_777 2 3 0.000412677
Lupinus albus Lalb_Chr02 1 CH_lal_276 2 2 0.000157447
Lonicera japonica GWHAAZE00000004 1 CH_lonja_486 2 2 0.000179662
Olea europaea scaffold629 1 CH_oeu_255 2 2 0.000160137
Amborella trichopoda AmTr_v1.0_scaffold00002 2 CH_atr_300 2 2 0.000476644
Brassica carinata ChrB01 2 CH_bca_941 2 2 0.000448905
Camellia sinensis var. sinensis Chr1 2 CH_camsi_777 2 3 0.000412677
Lupinus albus Lalb_Chr02 2 CH_lal_276 2 2 0.000157447
Lonicera japonica GWHAAZE00000004 2 CH_lonja_486 2 2 0.000179662
Olea europaea scaffold629 2 CH_oeu_255 2 2 0.000160137

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001