Functional clusters

Information

  • Type MapMan
  • Description Cellular respiration.oxidative phosphorylation.ATP synthase complex.peripheral MF1 subcomplex.subunit beta

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-3 1 CH_aar_201 2 2 0.000273698
Arabidopsis lyrata scaffold_6 1 CH_aly_89 3 4 0.0000000261395
Arabidopsis thaliana Chr5 1 CH_ath_70 3 3 0.00000000123118
Brassica carinata ChrC03 1 CH_bca_923 2 2 0.000448905
Brassica carinata ChrB01 1 CH_bca_924 2 2 0.000448905
Brassica carinata ChrB05 1 CH_bca_925 2 2 0.000448905
Brassica oleracea C3 1 CH_bol_343 2 2 0.000326861
Brassica oleracea C9 1 CH_bol_344 2 2 0.000326861
Brassica rapa A02 1 CH_bra_348 2 2 0.00064397
Brassica rapa A03 1 CH_bra_349 2 2 0.00064397
Brassica rapa A10 1 CH_bra_350 2 2 0.00064397
Cicer arietinum L. Ca_LG7_v3 1 CH_car_158 2 2 0.0000778301
Capsella rubella scaffold_6 1 CH_cru_318 2 2 0.000219346
Eutrema salsugineum scaffold_2 1 CH_esa_225 2 3 0.000228441
Gossypium raimondii Chr12 1 CH_gra_247 2 2 0.0000536107
Lupinus albus Lalb_Chr21 1 CH_lal_82 3 4 0.0000000661044
Medicago truncatula chr1 1 CH_mtr_515 2 2 0.0000410863
Physcomitrium patens Chr05 1 CH_ppa_156 2 2 0.000183818
Striga asiatica scaffold38 1 CH_sas_130 2 3 0.000562805
Selenicereus undatus Scaffold_3410 1 CH_sun_229 2 4 0.000435951
Tarenaya hassleriana NW_010960188.1 1 CH_tha_43 3 4 0.0000000292716
Aethionema arabicum LG-3 2 CH_aar_201 2 2 0.000273698
Arabidopsis lyrata scaffold_6 2 CH_aly_89 3 4 0.0000000261395
Arabidopsis thaliana Chr5 2 CH_ath_70 3 3 0.00000000123118
Brassica carinata ChrC03 2 CH_bca_923 2 2 0.000448905
Brassica carinata ChrB01 2 CH_bca_924 2 2 0.000448905
Brassica carinata ChrB05 2 CH_bca_925 2 2 0.000448905
Brassica oleracea C3 2 CH_bol_343 2 2 0.000326861
Brassica oleracea C9 2 CH_bol_344 2 2 0.000326861
Brassica rapa A02 2 CH_bra_348 2 2 0.00064397
Brassica rapa A03 2 CH_bra_349 2 2 0.00064397
Brassica rapa A10 2 CH_bra_350 2 2 0.00064397
Cicer arietinum L. Ca_LG7_v3 2 CH_car_158 2 2 0.0000778301
Capsella rubella scaffold_6 2 CH_cru_318 2 2 0.000219346
Eutrema salsugineum scaffold_2 2 CH_esa_225 2 3 0.000228441
Gossypium hirsutum A04 2 CH_ghi_618 2 2 0.000267016
Gossypium hirsutum D04 2 CH_ghi_619 2 2 0.000267016
Gossypium raimondii Chr12 2 CH_gra_247 2 2 0.0000536107
Lupinus albus Lalb_Chr21 2 CH_lal_82 3 4 0.0000000661044
Physcomitrium patens Chr05 2 CH_ppa_156 2 2 0.000183818
Striga asiatica scaffold38 2 CH_sas_130 2 3 0.000562805
Selenicereus undatus Scaffold_3410 2 CH_sun_229 2 4 0.000435951
Tarenaya hassleriana NW_010960188.1 2 CH_tha_43 3 4 0.0000000292716

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001