Functional clusters

Information

  • Type MapMan
  • Description Cellular respiration.oxidative phosphorylation.cytochrome c oxidase complex.core components.component COX5b

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC01 1 CH_bca_1159 2 2 0.000961939
Brassica carinata ChrC09 1 CH_bca_1160 2 2 0.000961939
Brassica carinata ChrC05 1 CH_bca_230 3 3 0.0000000822522
Brassica rapa A03 1 CH_bra_311 2 2 0.000429314
Citrullus lanatus CG_Chr07 1 CH_cla_211 2 3 0.000798344
Chenopodium quinoa C_Quinoa_Scaffold_3333 1 CH_cqu_579 2 4 0.000852811
Daucus carota DCARv2_Chr7 1 CH_dca_88 3 4 0.0000000244055
Eutrema salsugineum scaffold_13 1 CH_esa_241 2 2 0.00022845
Nicotiana tabacum Nitab4.5_0000151 1 CH_nta_140 2 2 0.000329182
Physcomitrium patens Chr19 1 CH_ppa_154 2 2 0.000183818
Papaver somniferum NW_020634374.1 1 CH_pso_434 2 2 0.0000675699
Salvia bowleyana GWHASIU00000007 1 CH_sbo_470 2 3 0.00081892
Sechium edule LG06 1 CH_sed_152 3 11 0.0000125884
Brassica carinata ChrC01 2 CH_bca_1159 2 2 0.000961939
Brassica carinata ChrC09 2 CH_bca_1160 2 2 0.000961939
Brassica carinata ChrC05 2 CH_bca_230 3 3 0.0000000822522
Brassica rapa A03 2 CH_bra_311 2 2 0.000429314
Citrullus lanatus CG_Chr07 2 CH_cla_211 2 3 0.000798344
Chenopodium quinoa C_Quinoa_Scaffold_3333 2 CH_cqu_579 2 4 0.000852811
Daucus carota DCARv2_Chr7 2 CH_dca_88 3 4 0.0000000244055
Eutrema salsugineum scaffold_13 2 CH_esa_241 2 2 0.00022845
Nicotiana tabacum Nitab4.5_0000151 2 CH_nta_140 2 2 0.000329182
Physcomitrium patens Chr19 2 CH_ppa_154 2 2 0.000183818
Papaver somniferum NW_020634374.1 2 CH_pso_434 2 2 0.0000675699
Salvia bowleyana GWHASIU00000007 2 CH_sbo_470 2 3 0.00081892
Sechium edule LG06 2 CH_sed_152 3 11 0.0000125884

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001