Functional clusters

Information

  • Type MapMan
  • Description Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_3 1 CH_aly_266 3 13 0.000104502
Lactuca sativa Lsat_1_v8_lg_7 1 CH_lsa_274 4 22 0.00000705604
Sapria himalayana scaffold47_4158293 1 CH_shi_35 4 10 0.0000000388278
Solanum lycopersicum SL4.0ch12 1 CH_sly_534 3 9 0.000666693
Arabidopsis lyrata scaffold_3 2 CH_aly_266 3 13 0.000104502
Lactuca sativa Lsat_1_v8_lg_7 2 CH_lsa_274 4 22 0.00000705604
Sapria himalayana scaffold47_4158293 2 CH_shi_35 4 10 0.0000000388278
Solanum lycopersicum SL4.0ch12 2 CH_sly_534 3 9 0.000666693

Available child term results

Ontology identifier Description Number of clusters
2.4.4.2.1.1 Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I).CcmABC complex.ATP-binding component CcmA 14
2.4.4.2.2 Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I).heme chaperone (CcmE) 4
2.4.4.2.3 Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I).apocytochrome-heme assembly complex 2
2.4.4.2.3.2 Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I).apocytochrome-heme assembly complex.component CcmFn 4
2.4.4.2.3.3 Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I).apocytochrome-heme assembly complex.component CcmH 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001