Functional clusters

Information

  • Type MapMan
  • Description Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core modules.carbonic anhydrase component (gamma-CA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Chenopodium quinoa C_Quinoa_Scaffold_2646 1 CH_cqu_419 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2370 1 CH_cqu_420 2 2 0.000284293
Phaseolus vulgaris Chr09 1 CH_pvu_441 2 3 0.000661214
Rhododendron simsii chr08 1 CH_rsi_337 2 2 0.0000645307
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_234 2 2 0.0000929238
Chenopodium quinoa C_Quinoa_Scaffold_2646 2 CH_cqu_419 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2370 2 CH_cqu_420 2 2 0.000284293
Phaseolus vulgaris Chr09 2 CH_pvu_441 2 3 0.000661214
Rhododendron simsii chr08 2 CH_rsi_337 2 2 0.0000645307
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_234 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001