Functional clusters

Information

  • Type MapMan
  • Description Cellular respiration.glycolysis.cytosolic glycolysis.phosphoglycerate mutase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC05 1 CH_bca_938 2 2 0.000448905
Brassica carinata ChrB07 1 CH_bca_939 2 2 0.000448905
Capsicum annuum PGAv.1.6.scaffold1134 1 CH_can_166 3 4 0.000000818863
Citrullus lanatus CG_Chr01 1 CH_cla_175 2 2 0.000266134
Fragaria vesca Fvb5 1 CH_fve_351 2 2 0.00017673
Hydrangea macrophylla Hma1.2p1_1123F.1 1 CH_hma_51 3 3 0.0000000740453
Petunia axillaris Peaxi162Scf00434 1 CH_pax_260 2 2 0.000211067
Physcomitrium patens Chr06 1 CH_ppa_300 2 2 0.000612726
Prunus persica Pp06 1 CH_ppe_465 2 2 0.000447577
Quercus lobata 3 1 CH_qlo_417 3 4 0.000000159926
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_603 2 2 0.000119596
Rhododendron simsii chr07 1 CH_rsi_447 2 2 0.000193592
Solanum lycopersicum SL4.0ch01 1 CH_sly_524 2 2 0.000586941
Solanum pennellii Spenn-ch01 1 CH_spe_511 2 2 0.000667186
Solanum tuberosum ST4.03ch01 1 CH_stu_31 6 7 1.16904e-17
Brassica carinata ChrC05 2 CH_bca_938 2 2 0.000448905
Brassica carinata ChrB07 2 CH_bca_939 2 2 0.000448905
Capsicum annuum PGAv.1.6.scaffold1134 2 CH_can_166 3 4 0.000000818863
Citrullus lanatus CG_Chr01 2 CH_cla_175 2 2 0.000266134
Fragaria vesca Fvb5 2 CH_fve_351 2 2 0.00017673
Hydrangea macrophylla Hma1.2p1_1123F.1 2 CH_hma_51 3 3 0.0000000740453
Petunia axillaris Peaxi162Scf00434 2 CH_pax_260 2 2 0.000211067
Physcomitrium patens Chr06 2 CH_ppa_300 2 2 0.000612726
Prunus persica Pp06 2 CH_ppe_465 2 2 0.000447577
Quercus lobata 3 2 CH_qlo_417 3 4 0.000000159926
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_603 2 2 0.000119596
Rhododendron simsii chr07 2 CH_rsi_447 2 2 0.000193592
Solanum lycopersicum SL4.0ch01 2 CH_sly_524 2 2 0.000586941
Solanum pennellii Spenn-ch01 2 CH_spe_511 2 2 0.000667186
Solanum tuberosum ST4.03ch01 2 CH_stu_31 6 7 1.16904e-17

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001