Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.AGC protein kinase superfamily.protein kinase (AGC-VI/PKA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_3 1 CH_aly_240 2 2 0.0000660044
Arabidopsis thaliana Chr3 1 CH_ath_225 2 2 0.0000286492
Brassica carinata ChrC05 1 CH_bca_164 3 3 0.00000000685435
Brassica carinata ChrC09 1 CH_bca_809 2 2 0.000213764
Brassica oleracea C5 1 CH_bol_278 2 2 0.0000980584
Cardamine hirsuta Chr3 1 CH_chi_250 2 2 0.0000691204
Capsella rubella scaffold_3 1 CH_cru_274 2 2 0.0000731154
Eutrema salsugineum scaffold_13 1 CH_esa_185 2 2 0.0000761499
Schrenkiella parvula ch3-1 1 CH_spa_177 2 2 0.000078734
Arabidopsis lyrata scaffold_3 2 CH_aly_240 2 2 0.0000660044
Arabidopsis thaliana Chr3 2 CH_ath_225 2 2 0.0000286492
Brassica carinata ChrC05 2 CH_bca_164 3 3 0.00000000685435
Brassica carinata ChrC09 2 CH_bca_809 2 2 0.000213764
Brassica oleracea C5 2 CH_bol_278 2 2 0.0000980584
Cardamine hirsuta Chr3 2 CH_chi_250 2 2 0.0000691204
Capsella rubella scaffold_3 2 CH_cru_274 2 2 0.0000731154
Eutrema salsugineum scaffold_13 2 CH_esa_185 2 2 0.0000761499
Schrenkiella parvula ch3-1 2 CH_spa_177 2 2 0.000078734

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001