Functional clusters
Information
- Type MapMan
- Description Protein modification.phosphorylation.CAMK protein kinase superfamily.SNF1-related protein kinase (SnRK2)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Citrullus lanatus | CG_Chr04 | 1 | CH_cla_56 | 4 | 13 | 0.000000313789 |
| Cucumis sativus L. | chr4 | 1 | CH_csa_43 | 6 | 22 | 0.00000000000313396 |
| Fragaria vesca | Fvb5 | 1 | CH_fve_199 | 3 | 4 | 0.00000174885 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 1 | CH_rch_98 | 5 | 9 | 0.000000000000601289 |
| Selenicereus undatus | Scaffold_33677 | 1 | CH_sun_60 | 3 | 3 | 0.00000174248 |
| Citrullus lanatus | CG_Chr04 | 2 | CH_cla_56 | 4 | 13 | 0.000000313789 |
| Cucumis sativus L. | chr4 | 2 | CH_csa_43 | 6 | 22 | 0.00000000000313396 |
| Fragaria vesca | Fvb5 | 2 | CH_fve_199 | 3 | 4 | 0.00000174885 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 2 | CH_rch_98 | 5 | 9 | 0.000000000000601289 |
| Selenicereus undatus | Scaffold_33677 | 2 | CH_sun_60 | 3 | 3 | 0.00000174248 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |