Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.CMGC protein kinase superfamily.CK-II protein kinase heterodimer.regulatory subunit beta

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 1 CH_arhy_726 2 2 0.000838273
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 1 CH_arhy_727 2 2 0.000838273
Carica papaya supercontig_98 1 CH_cpa_199 2 2 0.0000950661
Phaseolus vulgaris Chr03 1 CH_pvu_440 2 3 0.000661214
Rhododendron simsii chr11 1 CH_rsi_428 2 2 0.000193592
Solanum lycopersicum SL4.0ch10 1 CH_sly_518 2 2 0.000586941
Tripterygium wilfordii NC_052249.1 1 CH_twi_101 3 5 0.000000186475
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 2 CH_arhy_726 2 2 0.000838273
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 2 CH_arhy_727 2 2 0.000838273
Carica papaya supercontig_98 2 CH_cpa_199 2 2 0.0000950661
Phaseolus vulgaris Chr03 2 CH_pvu_440 2 3 0.000661214
Rhododendron simsii chr11 2 CH_rsi_428 2 2 0.000193592
Solanum lycopersicum SL4.0ch10 2 CH_sly_518 2 2 0.000586941
Tripterygium wilfordii NC_052249.1 2 CH_twi_101 3 5 0.000000186475

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001