Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.CMGC protein kinase superfamily.CK-II protein kinase heterodimer.catalytic subunit alpha

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 1 CH_acertr_156 4 40 0.000000479242
Arabidopsis lyrata scaffold_4 1 CH_aly_360 2 2 0.000396027
Arabidopsis thaliana Chr2 1 CH_ath_309 2 2 0.000171895
Coffea canephora chr7 1 CH_ccan_144 3 82 0.00000827704
Cardamine hirsuta Chr4 1 CH_chi_357 2 2 0.000414723
Capsella rubella scaffold_4 1 CH_cru_364 2 2 0.000438693
Eutrema salsugineum scaffold_15 1 CH_esa_277 2 2 0.000456899
Gossypium raimondii Chr03 1 CH_gra_440 2 2 0.00080416
Populus trichocarpa Chr05 1 CH_ptr_431 2 2 0.000346801
Salvia bowleyana GWHASIU00000003 1 CH_sbo_425 3 48 0.000535697
Salix brachista GWHAAZH00000005 1 CH_sbr_278 2 2 0.000189042
Schrenkiella parvula ch4-1 1 CH_spa_214 2 2 0.000236202
Theobroma cacao Chromosome_1 1 CH_tca_249 3 17 0.0000218659
Utricularia gibba unitig_899 1 CH_ugi_281 2 3 0.000661092
Acer truncatum chr3 2 CH_acertr_156 4 40 0.000000479242
Arabidopsis lyrata scaffold_4 2 CH_aly_360 2 2 0.000396027
Arabidopsis thaliana Chr2 2 CH_ath_309 2 2 0.000171895
Coffea canephora chr7 2 CH_ccan_144 3 82 0.00000827704
Cardamine hirsuta Chr4 2 CH_chi_357 2 2 0.000414723
Capsella rubella scaffold_4 2 CH_cru_364 2 2 0.000438693
Eutrema salsugineum scaffold_15 2 CH_esa_277 2 2 0.000456899
Gossypium raimondii Chr03 2 CH_gra_440 2 2 0.00080416
Populus trichocarpa Chr05 2 CH_ptr_431 2 2 0.000346801
Salvia bowleyana GWHASIU00000003 2 CH_sbo_425 3 48 0.000535697
Salix brachista GWHAAZH00000005 2 CH_sbr_278 2 2 0.000189042
Schrenkiella parvula ch4-1 2 CH_spa_214 2 2 0.000236202
Theobroma cacao Chromosome_1 2 CH_tca_249 3 17 0.0000218659
Utricularia gibba unitig_899 2 CH_ugi_281 2 3 0.000661092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001