Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.protein tyrosine phosphatase (PTP) superfamily.classical PTP phosphatase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC08 1 CH_bca_611 2 3 0.0000641286
Erigeron canadensis Conyza_canadensis_scaffold:9 1 CH_eca_279 2 2 0.0000448722
Glycine max Gm20 1 CH_gma_488 2 3 0.000341591
Helianthus annuus HanXRQChr13 1 CH_han_440 2 2 0.0000386429
Papaver somniferum NC_039360.1 1 CH_pso_215 3 6 0.0000000608729
Sequoiadendron giganteum chr1 1 CH_sgi_910 2 2 0.0000487151
Selenicereus undatus Scaffold_33675 1 CH_sun_210 2 2 0.000217992
Trifolium pratense Tp57577_TGAC_v2_scaf_247 1 CH_tpr_248 2 2 0.0000756974
Brassica carinata ChrC08 2 CH_bca_611 2 3 0.0000641286
Erigeron canadensis Conyza_canadensis_scaffold:9 2 CH_eca_279 2 2 0.0000448722
Glycine max Gm20 2 CH_gma_488 2 3 0.000341591
Helianthus annuus HanXRQChr13 2 CH_han_440 2 2 0.0000386429
Papaver somniferum NC_039360.1 2 CH_pso_215 3 6 0.0000000608729
Sequoiadendron giganteum chr1 2 CH_sgi_910 2 2 0.0000487151
Selenicereus undatus Scaffold_33675 2 CH_sun_210 2 2 0.000217992
Trifolium pratense Tp57577_TGAC_v2_scaf_247 2 CH_tpr_248 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001