Functional clusters
Information
- Type MapMan
- Description Protein modification.phosphorylation.STE protein kinase superfamily.protein kinase (MAPKK)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cannabis sativa | NC_044376.1 | 1 | CH_cansat_181 | 3 | 8 | 0.0000202675 |
| Daucus carota | DCARv2_Chr7 | 1 | CH_dca_135 | 3 | 3 | 0.000000512531 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 1 | CH_rch_297 | 3 | 3 | 0.000000286069 |
| Sequoiadendron giganteum | chr11 | 1 | CH_sgi_680 | 3 | 7 | 0.0000149422 |
| Zea mays | 3 | 1 | CH_zma_102 | 3 | 3 | 0.00000219616 |
| Cannabis sativa | NC_044376.1 | 2 | CH_cansat_181 | 3 | 8 | 0.0000202675 |
| Daucus carota | DCARv2_Chr7 | 2 | CH_dca_135 | 3 | 3 | 0.000000512531 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 2 | CH_rch_297 | 3 | 3 | 0.000000286069 |
| Sequoiadendron giganteum | chr11 | 2 | CH_sgi_680 | 3 | 7 | 0.0000149422 |
| Zea mays | 3 | 2 | CH_zma_102 | 3 | 3 | 0.00000219616 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |