Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (RKF3)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR06 1 CH_aox_327 2 3 0.000721742
Amborella trichopoda AmTr_v1.0_scaffold00017 1 CH_atr_230 3 34 0.000226105
Camellia sinensis var. sinensis Chr13 1 CH_camsi_372 3 4 0.00000208134
Camellia sinensis var. sinensis Chr3 1 CH_camsi_679 3 13 0.000148601
Capsicum annuum PGAv.1.6.scaffold798 1 CH_can_435 2 3 0.000743443
Carya illinoinensis Chr07 1 CH_cil_274 3 4 0.0000027657
Daucus carota DCARv2_Chr1 1 CH_dca_56 4 4 0.00000000025685
Erigeron canadensis Conyza_canadensis_scaffold:8 1 CH_eca_459 2 2 0.000448722
Erigeron canadensis Conyza_canadensis_scaffold:7 1 CH_eca_460 2 2 0.000448722
Fragaria vesca Fvb6 1 CH_fve_457 2 2 0.000589102
Glycine max Gm13 1 CH_gma_221 3 4 0.00000142607
Helianthus annuus HanXRQChr05 1 CH_han_145 4 7 0.000000000212034
Lactuca sativa Lsat_1_v8_lg_7 1 CH_lsa_458 2 2 0.000308404
Manihot esculenta Chromosome07 1 CH_mes_499 2 2 0.000915947
Marchantia polymorpha scaffold_37 1 CH_mpo_106 2 2 0.000331327
Nelumbo nucifera chr1 1 CH_nnu_409 2 2 0.000436015
Olea europaea chr10 1 CH_oeu_384 2 2 0.000533789
Prunus persica Pp06 1 CH_ppe_509 2 2 0.000745962
Phaseolus vulgaris Chr01 1 CH_pvu_154 3 3 0.000000283418
Quercus lobata CM012294 1 CH_qlo_454 3 5 0.00000039979
Rhododendron simsii chr05 1 CH_rsi_445 2 2 0.000193592
Sequoiadendron giganteum chr5 1 CH_sgi_370 4 8 0.00000000305775
Sequoiadendron giganteum chr10 1 CH_sgi_558 3 3 0.000000299026
Trochodendron aralioides group2 1 CH_tar_522 2 2 0.000600366
Theobroma cacao Chromosome_5 1 CH_tca_441 2 2 0.000732386
Vigna mungo CM024073.1 1 CH_vmu_52 4 6 0.00000000152921
Aquilegia oxysepala CHR06 2 CH_aox_327 2 3 0.000721742
Amborella trichopoda AmTr_v1.0_scaffold00017 2 CH_atr_230 3 34 0.000226105
Camellia sinensis var. sinensis Chr13 2 CH_camsi_372 3 4 0.00000208134
Camellia sinensis var. sinensis Chr3 2 CH_camsi_679 3 13 0.000148601
Capsicum annuum PGAv.1.6.scaffold798 2 CH_can_435 2 3 0.000743443
Carya illinoinensis Chr07 2 CH_cil_274 3 4 0.0000027657
Daucus carota DCARv2_Chr1 2 CH_dca_56 4 4 0.00000000025685
Erigeron canadensis Conyza_canadensis_scaffold:8 2 CH_eca_459 2 2 0.000448722
Erigeron canadensis Conyza_canadensis_scaffold:7 2 CH_eca_460 2 2 0.000448722
Eucalyptus grandis Chr09 2 CH_egr_450 3 3 0.000000102767
Fragaria vesca Fvb6 2 CH_fve_457 2 2 0.000589102
Glycine max Gm13 2 CH_gma_221 3 4 0.00000142607
Helianthus annuus HanXRQChr05 2 CH_han_145 4 7 0.000000000212034
Lactuca sativa Lsat_1_v8_lg_7 2 CH_lsa_458 2 2 0.000308404
Manihot esculenta Chromosome07 2 CH_mes_499 2 2 0.000915947
Marchantia polymorpha scaffold_37 2 CH_mpo_106 2 2 0.000331327
Nelumbo nucifera chr1 2 CH_nnu_409 2 2 0.000436015
Olea europaea chr10 2 CH_oeu_384 2 2 0.000533789
Prunus persica Pp06 2 CH_ppe_509 2 2 0.000745962
Phaseolus vulgaris Chr01 2 CH_pvu_154 3 3 0.000000283418
Quercus lobata CM012294 2 CH_qlo_454 3 5 0.00000039979
Rhododendron simsii chr05 2 CH_rsi_445 2 2 0.000193592
Sequoiadendron giganteum chr5 2 CH_sgi_370 4 8 0.00000000305775
Sequoiadendron giganteum chr10 2 CH_sgi_558 3 3 0.000000299026
Trochodendron aralioides group2 2 CH_tar_522 2 2 0.000600366
Theobroma cacao Chromosome_5 2 CH_tca_441 2 2 0.000732386
Vigna mungo CM024073.1 2 CH_vmu_52 4 6 0.00000000152921

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001