Functional clusters
Information
- Type MapMan
- Description Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (LRR-II)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr6 | 1 | CH_camsi_842 | 3 | 10 | 0.000502217 |
| Cucumis sativus L. | scaffold66 | 1 | CH_csa_288 | 4 | 41 | 0.000413301 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 1 | CH_lsa_66 | 5 | 7 | 0.00000000000220038 |
| Punica granatum | NC_045129.1 | 1 | CH_pgr_156 | 3 | 3 | 0.00000384286 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_153 | 3 | 3 | 0.00000284963 |
| Camellia sinensis var. sinensis | Chr6 | 2 | CH_camsi_842 | 3 | 10 | 0.000502217 |
| Cucumis sativus L. | scaffold66 | 2 | CH_csa_288 | 4 | 41 | 0.000413301 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 2 | CH_lsa_66 | 5 | 7 | 0.00000000000220038 |
| Punica granatum | NC_045129.1 | 2 | CH_pgr_156 | 3 | 3 | 0.00000384286 |
| Vaccinium macrocarpon | chr5_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_153 | 3 | 3 | 0.00000284963 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |