Functional clusters
Information
- Type MapMan
- Description Protein modification.protein folding.protein folding catalyst (Cyclophilin)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr2 | 1 | CH_acertr_193 | 5 | 19 | 0.00000362261 |
| Actinidia chinensis | Lachesis_group10 | 1 | CH_ach_100 | 3 | 4 | 0.0000795376 |
| Amborella trichopoda | AmTr_v1.0_scaffold00041 | 1 | CH_atr_74 | 4 | 5 | 0.000000036419 |
| Brassica napus | C04 | 1 | CH_bna_42 | 6 | 9 | 0.000000000000376817 |
| Chlamydomonas reinhardtii | chromosome_12 | 1 | CH_cre_20 | 4 | 9 | 0.00000588163 |
| Phaseolus vulgaris | Chr01 | 1 | CH_pvu_229 | 3 | 3 | 0.0000143409 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 1 | CH_rch_355 | 4 | 10 | 0.00000162865 |
| Acer truncatum | chr2 | 2 | CH_acertr_193 | 5 | 19 | 0.00000362261 |
| Actinidia chinensis | Lachesis_group10 | 2 | CH_ach_100 | 3 | 4 | 0.0000795376 |
| Amborella trichopoda | AmTr_v1.0_scaffold00041 | 2 | CH_atr_74 | 4 | 5 | 0.000000036419 |
| Chlamydomonas reinhardtii | chromosome_12 | 2 | CH_cre_20 | 4 | 9 | 0.00000588163 |
| Phaseolus vulgaris | Chr01 | 2 | CH_pvu_229 | 3 | 3 | 0.0000143409 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 2 | CH_rch_355 | 4 | 10 | 0.00000162865 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |