Functional clusters

Information

  • Type MapMan
  • Description Protein modification.targeting peptide maturation.mitochondrion.targeting peptid degrading peptidase (PreP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 1 CH_acertr_329 2 2 0.000070497
Actinidia chinensis Lachesis_group12 1 CH_ach_91 2 2 0.0000543213
Capsicum annuum PGAv.1.6.scaffold1041 1 CH_can_284 2 2 0.0000826105
Citrus clementina scaffold_8 1 CH_ccl_374 2 3 0.000246083
Daucus carota DCARv2_Chr1 1 CH_dca_311 2 2 0.000191333
Marchantia polymorpha scaffold_138 1 CH_mpo_118 2 4 0.000662581
Prunus persica Pp08 1 CH_ppe_346 2 2 0.0000745962
Sequoiadendron giganteum chr5 1 CH_sgi_417 3 3 0.00000000355983
Acer truncatum chr5 2 CH_acertr_329 2 2 0.000070497
Actinidia chinensis Lachesis_group12 2 CH_ach_91 2 2 0.0000543213
Capsicum annuum PGAv.1.6.scaffold1041 2 CH_can_284 2 2 0.0000826105
Citrus clementina scaffold_8 2 CH_ccl_374 2 3 0.000246083
Daucus carota DCARv2_Chr1 2 CH_dca_311 2 2 0.000191333
Marchantia polymorpha scaffold_138 2 CH_mpo_118 2 4 0.000662581
Prunus persica Pp08 2 CH_ppe_346 2 2 0.0000745962
Sequoiadendron giganteum chr5 2 CH_sgi_417 3 3 0.00000000355983

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001