Functional clusters

Information

  • Type MapMan
  • Description Protein modification.glycosylation.O-linked glycosylation.hydroxyproline O-linked glycosylation.hydroxyproline-O-arabinosyltransferase (HPAT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 1 CH_amhyb_260 2 2 0.000841751
Beta vulgaris Chr4_EL10_PGA_scaffold1 1 CH_bvu_268 2 2 0.00049675
Erigeron canadensis Conyza_canadensis_scaffold:3 1 CH_eca_264 2 2 0.0000448722
Helianthus annuus HanXRQChr04 1 CH_han_713 2 3 0.00069554
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 2 CH_amhyb_260 2 2 0.000841751
Beta vulgaris Chr4_EL10_PGA_scaffold1 2 CH_bvu_268 2 2 0.00049675
Erigeron canadensis Conyza_canadensis_scaffold:3 2 CH_eca_264 2 2 0.0000448722
Helianthus annuus HanXRQChr04 2 CH_han_713 2 3 0.00069554

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001