Functional clusters
Information
- Type MapMan
- Description Protein modification.glycosylation.N-linked glycosylation.paucimannosidic N-glycan formation.beta-N-acetylhexosaminidase (HEXO)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr10 | 1 | CH_acertr_124 | 3 | 3 | 0.00000007455 |
| Amborella trichopoda | AmTr_v1.0_scaffold00068 | 1 | CH_atr_114 | 3 | 5 | 0.000000946474 |
| Chara braunii | BFEA01000003 | 1 | CH_cbr_63 | 2 | 2 | 0.0000719269 |
| Coffea canephora | chr2 | 1 | CH_ccan_108 | 3 | 30 | 0.00000198797 |
| Citrus clementina | scaffold_3 | 1 | CH_ccl_481 | 2 | 2 | 0.000820311 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3163 | 1 | CH_cqu_606 | 2 | 2 | 0.000995025 |
| Lonicera japonica | GWHAAZE00000001 | 1 | CH_lonja_122 | 5 | 29 | 0.000000000640062 |
| Magnolia biondii | Chr01 | 1 | CH_mbi_188 | 3 | 5 | 0.000000353765 |
| Olea europaea | chr16 | 1 | CH_oeu_402 | 2 | 2 | 0.000800683 |
| Quercus lobata | 4 | 1 | CH_qlo_561 | 3 | 6 | 0.00000671448 |
| Salvia bowleyana | GWHASIU00000001 | 1 | CH_sbo_388 | 3 | 31 | 0.000278577 |
| Sequoiadendron giganteum | chr7 | 1 | CH_sgi_523 | 3 | 3 | 0.000000124594 |
| Selaginella moellendorffii | scaffold_55 | 1 | CH_smo_49 | 4 | 24 | 0.00000325481 |
| Solanum pennellii | Spenn-ch05 | 1 | CH_spe_430 | 2 | 2 | 0.000266874 |
| Acer truncatum | chr10 | 2 | CH_acertr_124 | 3 | 3 | 0.00000007455 |
| Amborella trichopoda | AmTr_v1.0_scaffold00068 | 2 | CH_atr_114 | 3 | 5 | 0.000000946474 |
| Chara braunii | BFEA01000003 | 2 | CH_cbr_63 | 2 | 2 | 0.0000719269 |
| Coffea canephora | chr2 | 2 | CH_ccan_108 | 3 | 30 | 0.00000198797 |
| Citrus clementina | scaffold_3 | 2 | CH_ccl_481 | 2 | 2 | 0.000820311 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3163 | 2 | CH_cqu_606 | 2 | 2 | 0.000995025 |
| Eucalyptus grandis | Chr11 | 2 | CH_egr_772 | 2 | 2 | 0.000175582 |
| Lonicera japonica | GWHAAZE00000001 | 2 | CH_lonja_122 | 5 | 29 | 0.000000000640062 |
| Magnolia biondii | Chr01 | 2 | CH_mbi_188 | 3 | 5 | 0.000000353765 |
| Olea europaea | chr16 | 2 | CH_oeu_402 | 2 | 2 | 0.000800683 |
| Quercus lobata | 4 | 2 | CH_qlo_561 | 3 | 6 | 0.00000671448 |
| Salvia bowleyana | GWHASIU00000001 | 2 | CH_sbo_388 | 3 | 31 | 0.000278577 |
| Sequoiadendron giganteum | chr7 | 2 | CH_sgi_523 | 3 | 3 | 0.000000124594 |
| Selaginella moellendorffii | scaffold_55 | 2 | CH_smo_49 | 4 | 24 | 0.00000325481 |
| Solanum pennellii | Spenn-ch05 | 2 | CH_spe_430 | 2 | 2 | 0.000266874 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |