Functional clusters

Information

  • Type MapMan
  • Description Protein modification.glycosylation.N-linked glycosylation.complex N-glycan maturation.N-acetylglucosamine transferase (GnT-I)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00044 1 CH_atr_179 2 2 0.0000794407
Camellia sinensis var. sinensis Chr12 1 CH_camsi_434 3 12 0.00000693535
Ceratophyllum demersum 5 1 CH_cde_99 2 2 0.0000789796
Carpinus fangiana Cfa02 1 CH_cfa_225 2 2 0.0000757346
Lonicera japonica GWHAAZE00000005 1 CH_lonja_368 2 2 0.0000598874
Medicago truncatula chr3 1 CH_mtr_513 2 2 0.0000410863
Quercus lobata 11 1 CH_qlo_656 2 2 0.0000516289
Simmondsia chinensis GWHAASQ00000018 1 CH_sci_246 2 4 0.000510812
Solanum tuberosum ST4.03ch01 1 CH_stu_377 2 2 0.0000512453
Vigna mungo CM024072.1 1 CH_vmu_193 2 2 0.0000646141
Amborella trichopoda AmTr_v1.0_scaffold00044 2 CH_atr_179 2 2 0.0000794407
Camellia sinensis var. sinensis Chr12 2 CH_camsi_434 3 12 0.00000693535
Ceratophyllum demersum 5 2 CH_cde_99 2 2 0.0000789796
Carpinus fangiana Cfa02 2 CH_cfa_225 2 2 0.0000757346
Eucalyptus grandis Chr07 2 CH_egr_673 2 2 0.0000585274
Lonicera japonica GWHAAZE00000005 2 CH_lonja_368 2 2 0.0000598874
Quercus lobata 11 2 CH_qlo_656 2 2 0.0000516289
Simmondsia chinensis GWHAASQ00000018 2 CH_sci_246 2 4 0.000510812
Solanum tuberosum ST4.03ch01 2 CH_stu_377 2 2 0.0000512453
Vigna mungo CM024072.1 2 CH_vmu_193 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001