Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.organelle machinery.plastidial ribosome.plastidial ribosome-associated proteins.ribosome biogenesis factor (RsgA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_2 1 CH_aly_204 3 31 0.0000293481
Arabidopsis thaliana Chr1 1 CH_ath_300 2 4 0.00017189
Corylus avellana 9 1 CH_cav_246 2 2 0.0000766695
Chenopodium quinoa C_Quinoa_Scaffold_1214 1 CH_cqu_357 2 2 0.000142146
Capsella rubella scaffold_2 1 CH_cru_308 2 3 0.000219338
Eutrema salsugineum scaffold_9 1 CH_esa_224 2 3 0.000228441
Pisum sativum chr5LG3 1 CH_psa_266 2 3 0.000156486
Schrenkiella parvula ch5-6 1 CH_spa_204 2 3 0.000236193
Arabidopsis lyrata scaffold_2 2 CH_aly_204 3 31 0.0000293481
Arabidopsis thaliana Chr1 2 CH_ath_300 2 4 0.00017189
Corylus avellana 9 2 CH_cav_246 2 2 0.0000766695
Chenopodium quinoa C_Quinoa_Scaffold_1214 2 CH_cqu_357 2 2 0.000142146
Capsella rubella scaffold_2 2 CH_cru_308 2 3 0.000219338
Eutrema salsugineum scaffold_9 2 CH_esa_224 2 3 0.000228441
Pisum sativum chr5LG3 2 CH_psa_266 2 3 0.000156486
Schrenkiella parvula ch5-6 2 CH_spa_204 2 3 0.000236193

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001