Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.scaffold_36 1 CH_arhy_154 8 52 0.000000000313288
Helianthus annuus HanXRQChr13 1 CH_han_120 8 25 0.000000000035652
Populus trichocarpa Chr13 1 CH_ptr_215 5 24 0.000000833373
Sechium edule Contig00347 1 CH_sed_225 5 37 0.000078552
Solanum lycopersicum SL4.0ch00 1 CH_sly_58 9 57 0.000000000000276626
Zea mays scaf_33 1 CH_zma_100 5 26 0.00000166715
Zea mays 1 1 CH_zma_129 4 13 0.0000210303
Arachis hypogaea arahy.Tifrunner.gnm1.scaffold_36 2 CH_arhy_154 8 52 0.000000000313288
Helianthus annuus HanXRQChr13 2 CH_han_120 8 25 0.000000000035652
Populus trichocarpa Chr13 2 CH_ptr_215 5 24 0.000000833373
Sechium edule Contig00347 2 CH_sed_225 5 37 0.000078552
Solanum lycopersicum SL4.0ch00 2 CH_sly_58 9 57 0.000000000000276626
Zea mays scaf_33 2 CH_zma_100 5 26 0.00000166715
Zea mays 1 2 CH_zma_129 4 13 0.0000210303

Available child term results

Ontology identifier Description Number of clusters
17.7.2.2.17 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS17 8
17.7.2.2.18 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS18 2
17.7.2.2.2 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS2 2
17.7.2.2.20 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS20 3
17.7.2.2.22 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psPSRP2 3
17.7.2.2.23 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psPSRP3 4
17.7.2.2.24 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psPSRP4 2
17.7.2.2.5 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS5 4
17.7.2.2.6 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS6 6
17.7.2.2.7 Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS7 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001