Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Gossypium raimondii Chr01 1 CH_gra_230 3 5 0.0000417471
Helianthus annuus HanXRQMT 1 CH_han_457 4 22 0.0000451703
Nelumbo nucifera chr1 1 CH_nnu_24 9 53 0.0000000000000049676
Gossypium raimondii Chr01 2 CH_gra_230 3 5 0.0000417471
Helianthus annuus HanXRQMT 2 CH_han_457 4 22 0.0000451703
Nelumbo nucifera chr1 2 CH_nnu_24 9 53 0.0000000000000049676

Available child term results

Ontology identifier Description Number of clusters
17.7.1.2.1 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS2 2
17.7.1.2.11 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS13 or psRPS13 38
17.7.1.2.12 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS14 4
17.7.1.2.13 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS15 2
17.7.1.2.14 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS16 3
17.7.1.2.15 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS17 4
17.7.1.2.16 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS18 10
17.7.1.2.17 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS19 2
17.7.1.2.18 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS21 or psRPS21 8
17.7.1.2.3 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS4 2
17.7.1.2.4 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS5 8
17.7.1.2.5 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS6 4
17.7.1.2.6 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS7 2
17.7.1.2.7 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS9 2
17.7.1.2.9 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS11 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001