Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL30

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC03 1 CH_bca_1050 2 3 0.000641272
Capsicum annuum PGAv.1.6.scaffold358 1 CH_can_340 2 2 0.000247831
Hydrangea macrophylla Hma1.2p1_0177F.1 1 CH_hma_341 2 2 0.000333259
Lotus japonicus Contig00564 1 CH_lja_111 3 3 0.0000000767031
Brassica carinata ChrC03 2 CH_bca_1050 2 3 0.000641272
Capsicum annuum PGAv.1.6.scaffold358 2 CH_can_340 2 2 0.000247831
Eucalyptus grandis Chr02 2 CH_egr_874 2 3 0.000526721
Hydrangea macrophylla Hma1.2p1_0177F.1 2 CH_hma_341 2 2 0.000333259
Lotus japonicus Contig00564 2 CH_lja_111 3 3 0.0000000767031

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001