Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.organelle machinery.mitochondrial ribosome

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala SUPER_12 1 CH_aox_259 3 3 0.000330161
Arachis hypogaea arahy.Tifrunner.gnm1.scaffold_22 1 CH_arhy_405 7 71 0.0000258815
Arabidopsis thaliana ChrM 1 CH_ath_359 5 57 0.000304427
Brassica oleracea Boleracea_scaffold_28 1 CH_bol_74 8 57 0.00000000790116
Brassica rapa Brapa_scaffold_48 1 CH_bra_160 7 65 0.00000856537
Cannabis sativa NC_029855.1 1 CH_cansat_31 9 30 0.0000000000000362583
Daucus carota DCARv2_MT 1 CH_dca_67 7 26 0.00000000187209
Lupinus albus Lalb_Chr00c21 1 CH_lal_34 8 25 0.0000000000116761
Magnolia biondii Chr05 1 CH_mbi_158 6 28 0.0000000975174
Salvia bowleyana GWHASIU00000001 1 CH_sbo_139 7 51 0.0000000742734
Solanum lycopersicum SL4.0ch00 1 CH_sly_262 7 77 0.0000215341
Utricularia gibba unitig_87 1 CH_ugi_98 4 7 0.00000954683
Aquilegia oxysepala SUPER_12 2 CH_aox_259 3 3 0.000330161
Arachis hypogaea arahy.Tifrunner.gnm1.scaffold_22 2 CH_arhy_405 7 71 0.0000258815
Arabidopsis thaliana ChrM 2 CH_ath_359 5 57 0.000304427
Brassica oleracea Boleracea_scaffold_28 2 CH_bol_74 8 57 0.00000000790116
Brassica rapa Brapa_scaffold_48 2 CH_bra_160 7 65 0.00000856537
Cannabis sativa NC_029855.1 2 CH_cansat_31 9 30 0.0000000000000362583
Daucus carota DCARv2_MT 2 CH_dca_67 7 26 0.00000000187209
Lupinus albus Lalb_Chr00c21 2 CH_lal_34 8 25 0.0000000000116761
Magnolia biondii Chr05 2 CH_mbi_158 6 28 0.0000000975174
Salvia bowleyana GWHASIU00000001 2 CH_sbo_139 7 51 0.0000000742734
Solanum lycopersicum SL4.0ch00 2 CH_sly_262 7 77 0.0000215341
Utricularia gibba unitig_87 2 CH_ugi_98 4 7 0.00000954683

Available child term results

Ontology identifier Description Number of clusters
17.7.1.1 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome 2
17.7.1.1.10 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL10 or psRPL10 2
17.7.1.1.11 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL11 8
17.7.1.1.12 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL13 2
17.7.1.1.13 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL14 12
17.7.1.1.14 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL15 4
17.7.1.1.15 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL16 4
17.7.1.1.16 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL17 2
17.7.1.1.17 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL18 2
17.7.1.1.18 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL19 2
17.7.1.1.19 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL20 2
17.7.1.1.2 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL2-N-terminal 2
17.7.1.1.21 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL22 12
17.7.1.1.22 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL23 4
17.7.1.1.23 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL24 4
17.7.1.1.24 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL27 10
17.7.1.1.25 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL28 2
17.7.1.1.26 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL29 4
17.7.1.1.27 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL30 9
17.7.1.1.28 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL33 2
17.7.1.1.29 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL36 7
17.7.1.1.5 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL4 2
17.7.1.1.6 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL5 4
17.7.1.1.8 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL7/L12 4
17.7.1.1.9 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL9 4
17.7.1.2 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome 6
17.7.1.2.1 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS2 2
17.7.1.2.11 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS13 or psRPS13 38
17.7.1.2.12 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS14 4
17.7.1.2.13 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS15 2
17.7.1.2.14 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS16 3
17.7.1.2.15 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS17 4
17.7.1.2.16 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS18 10
17.7.1.2.17 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS19 2
17.7.1.2.18 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS21 or psRPS21 8
17.7.1.2.3 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS4 2
17.7.1.2.4 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS5 8
17.7.1.2.5 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS6 4
17.7.1.2.6 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS7 2
17.7.1.2.7 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS9 2
17.7.1.2.9 Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS11 2
17.7.1.3.1 Protein biosynthesis.organelle machinery.mitochondrial ribosome.mitochondrial ribosome-associated proteins.regulatory protein (PNM1) 4
17.7.1.3.2 Protein biosynthesis.organelle machinery.mitochondrial ribosome.mitochondrial ribosome-associated proteins.regulatory protein (PPR336) 8
17.7.1.3.3 Protein biosynthesis.organelle machinery.mitochondrial ribosome.mitochondrial ribosome-associated proteins.ribosome biogenesis GTPase (SIN2) 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001