Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.translation elongation.eEF1 aminoacyl-tRNA binding factor activity.eEF1B eEF1A-GDP-recycling complex.component eEF1B-beta/-delta

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr9 1 CH_acertr_490 2 2 0.000422982
Amborella trichopoda AmTr_v1.0_scaffold00038 1 CH_atr_249 2 2 0.000238322
Olea europaea chr12 1 CH_oeu_372 2 2 0.000533789
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_660 2 2 0.000239192
Rhododendron simsii chr12 1 CH_rsi_555 2 2 0.000645307
Rhododendron simsii chr02 1 CH_rsi_556 2 2 0.000645307
Sequoiadendron giganteum chr7 1 CH_sgi_1308 2 2 0.000487151
Schrenkiella parvula ch1-1 1 CH_spa_255 2 2 0.000472404
Acer truncatum chr9 2 CH_acertr_490 2 2 0.000422982
Amborella trichopoda AmTr_v1.0_scaffold00038 2 CH_atr_249 2 2 0.000238322
Olea europaea chr12 2 CH_oeu_372 2 2 0.000533789
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_660 2 2 0.000239192
Rhododendron simsii chr12 2 CH_rsi_555 2 2 0.000645307
Rhododendron simsii chr02 2 CH_rsi_556 2 2 0.000645307
Sequoiadendron giganteum chr7 2 CH_sgi_1308 2 2 0.000487151
Schrenkiella parvula ch1-1 2 CH_spa_255 2 2 0.000472404

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001