Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.translation initiation.mRNA loading.eIF4F mRNA unwinding complex.component eIF4G

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-1 1 CH_aar_149 2 2 0.0000912326
Actinidia chinensis Lachesis_group16 1 CH_ach_182 2 2 0.000325928
Cannabis sativa NC_044370.1 1 CH_cansat_218 2 2 0.0000656642
Capsicum annuum PGAv.1.6.scaffold756 1 CH_can_339 2 2 0.000247831
Cicer arietinum L. Ca_LG3_v3 1 CH_car_74 3 10 0.0000010901
Corylus avellana 1 1 CH_cav_393 2 4 0.000459982
Citrus clementina scaffold_3 1 CH_ccl_294 2 2 0.0000820311
Ceratophyllum demersum 2 1 CH_cde_169 2 2 0.000236939
Carpinus fangiana Cfa04 1 CH_cfa_221 2 2 0.0000757346
Daucus carota DCARv2_Chr7 1 CH_dca_90 3 3 0.0000000244062
Erigeron canadensis Conyza_canadensis_scaffold:4 1 CH_eca_428 2 3 0.000403835
Erythranthe guttata scaffold_2 1 CH_egut_290 2 2 0.0000728147
Gossypium raimondii Chr04 1 CH_gra_407 2 2 0.000536107
Lupinus albus Lalb_Chr13 1 CH_lal_303 2 2 0.000314895
Malus domestica Chr07 1 CH_mdo_242 3 8 0.000000483102
Punica granatum NC_045130.1 1 CH_pgr_203 2 2 0.0000750356
Quercus lobata 4 1 CH_qlo_622 3 39 0.0000365076
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_473 2 2 0.0000398653
Sequoiadendron giganteum chr8 1 CH_sgi_551 3 6 0.00000028475
Trochodendron aralioides group15 1 CH_tar_511 2 2 0.000600366
Trifolium pratense Tp57577_TGAC_v2_scaf_192 1 CH_tpr_304 2 2 0.000227092
Aethionema arabicum LG-1 2 CH_aar_149 2 2 0.0000912326
Actinidia chinensis Lachesis_group16 2 CH_ach_182 2 2 0.000325928
Cannabis sativa NC_044370.1 2 CH_cansat_218 2 2 0.0000656642
Capsicum annuum PGAv.1.6.scaffold756 2 CH_can_339 2 2 0.000247831
Cicer arietinum L. Ca_LG3_v3 2 CH_car_74 3 10 0.0000010901
Corylus avellana 1 2 CH_cav_393 2 4 0.000459982
Citrus clementina scaffold_3 2 CH_ccl_294 2 2 0.0000820311
Ceratophyllum demersum 2 2 CH_cde_169 2 2 0.000236939
Carpinus fangiana Cfa04 2 CH_cfa_221 2 2 0.0000757346
Daucus carota DCARv2_Chr7 2 CH_dca_90 3 3 0.0000000244062
Erigeron canadensis Conyza_canadensis_scaffold:4 2 CH_eca_428 2 3 0.000403835
Erythranthe guttata scaffold_2 2 CH_egut_290 2 2 0.0000728147
Gossypium hirsutum D08 2 CH_ghi_889 2 2 0.000961256
Gossypium raimondii Chr04 2 CH_gra_407 2 2 0.000536107
Lupinus albus Lalb_Chr13 2 CH_lal_303 2 2 0.000314895
Malus domestica Chr07 2 CH_mdo_242 3 8 0.000000483102
Punica granatum NC_045130.1 2 CH_pgr_203 2 2 0.0000750356
Quercus lobata 4 2 CH_qlo_622 3 39 0.0000365076
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_473 2 2 0.0000398653
Sequoiadendron giganteum chr8 2 CH_sgi_551 3 6 0.00000028475
Trochodendron aralioides group15 2 CH_tar_511 2 2 0.000600366
Trifolium pratense Tp57577_TGAC_v2_scaf_192 2 CH_tpr_304 2 2 0.000227092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001