Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF3 mRNA-to-PIC binding complex.component eIF3g

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 1 CH_acertr_288 2 2 0.000070497
Amborella trichopoda AmTr_v1.0_scaffold00058 1 CH_atr_248 2 2 0.000238322
Brassica carinata ChrC05 1 CH_bca_229 3 3 0.0000000822522
Brassica oleracea C1 1 CH_bol_341 2 2 0.000326861
Ceratophyllum demersum 8 1 CH_cde_224 2 2 0.000473878
Carpinus fangiana Cfa01 1 CH_cfa_220 2 2 0.0000757346
Olea europaea chr4 1 CH_oeu_230 2 2 0.000160137
Oryza sativa ssp. japonica chr02 1 CH_osa_206 2 2 0.0000528123
Pisum sativum chr7LG7 1 CH_psa_216 2 2 0.0000521635
Quercus lobata 8 1 CH_qlo_794 2 2 0.000154887
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_785 2 3 0.000717541
Solanum lycopersicum SL4.0ch08 1 CH_sly_200 3 8 0.00000115725
Utricularia gibba unitig_37 1 CH_ugi_147 2 2 0.0000734592
Acer truncatum chr3 2 CH_acertr_288 2 2 0.000070497
Amborella trichopoda AmTr_v1.0_scaffold00058 2 CH_atr_248 2 2 0.000238322
Brassica carinata ChrC05 2 CH_bca_229 3 3 0.0000000822522
Brassica oleracea C1 2 CH_bol_341 2 2 0.000326861
Ceratophyllum demersum 8 2 CH_cde_224 2 2 0.000473878
Carpinus fangiana Cfa01 2 CH_cfa_220 2 2 0.0000757346
Eucalyptus grandis Chr07 2 CH_egr_482 3 8 0.000000287705
Olea europaea chr4 2 CH_oeu_230 2 2 0.000160137
Oryza sativa ssp. japonica chr02 2 CH_osa_206 2 2 0.0000528123
Pisum sativum chr7LG7 2 CH_psa_216 2 2 0.0000521635
Quercus lobata 8 2 CH_qlo_794 2 2 0.000154887
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_785 2 3 0.000717541
Solanum lycopersicum SL4.0ch08 2 CH_sly_200 3 8 0.00000115725
Utricularia gibba unitig_37 2 CH_ugi_147 2 2 0.0000734592

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001