Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF2 Met-tRNA binding factor activity.eIF2 Met-tRNA binding factor complex.component eIF2-alpha

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold220 1 CH_can_54 4 5 0.00000000000845732
Erigeron canadensis Conyza_canadensis_scaffold:5 1 CH_eca_499 2 3 0.000807658
Helianthus annuus HanXRQChr03 1 CH_han_493 2 2 0.000115929
Lactuca sativa Lsat_1_v8_lg_6 1 CH_lsa_326 2 2 0.0000514007
Magnolia biondii Chr01 1 CH_mbi_549 2 3 0.000437077
Medicago truncatula chr3 1 CH_mtr_197 3 3 0.00000000253218
Quercus lobata 9 1 CH_qlo_748 2 3 0.000154883
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_66 4 10 0.000000000505431
Capsicum annuum PGAv.1.6.scaffold220 2 CH_can_54 4 5 0.00000000000845732
Erigeron canadensis Conyza_canadensis_scaffold:5 2 CH_eca_499 2 3 0.000807658
Helianthus annuus HanXRQChr03 2 CH_han_493 2 2 0.000115929
Lactuca sativa Lsat_1_v8_lg_6 2 CH_lsa_326 2 2 0.0000514007
Magnolia biondii Chr01 2 CH_mbi_549 2 3 0.000437077
Quercus lobata 9 2 CH_qlo_748 2 3 0.000154883
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_66 4 10 0.000000000505431

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001