Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF1 PIC assembly factor activity.assembly factor (eIF1A)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR04 1 CH_aox_279 2 2 0.000481193
Brassica napus A05 1 CH_bna_532 3 22 0.000174664
Coffea canephora chr1 1 CH_ccan_358 2 8 0.000715475
Ceratophyllum demersum 1 1 CH_cde_223 2 2 0.000473878
Erythranthe guttata scaffold_2 1 CH_egut_359 2 2 0.000218444
Hydrangea macrophylla Hma1.2p1_0384F.1 1 CH_hma_408 2 3 0.000999685
Lactuca sativa Lsat_1_v8_lg_7 1 CH_lsa_544 2 4 0.000925133
Olea europaea chr3 1 CH_oeu_65 3 3 0.0000000854814
Papaver somniferum NW_020631041.1 1 CH_pso_242 3 4 0.000000106529
Papaver somniferum NC_039360.1 1 CH_pso_627 2 2 0.000472989
Trifolium pratense Tp57577_TGAC_v2_LG5 1 CH_tpr_362 2 2 0.000454184
Aquilegia oxysepala CHR04 2 CH_aox_279 2 2 0.000481193
Coffea canephora chr1 2 CH_ccan_358 2 8 0.000715475
Ceratophyllum demersum 1 2 CH_cde_223 2 2 0.000473878
Erythranthe guttata scaffold_2 2 CH_egut_359 2 2 0.000218444
Hydrangea macrophylla Hma1.2p1_0384F.1 2 CH_hma_408 2 3 0.000999685
Lactuca sativa Lsat_1_v8_lg_7 2 CH_lsa_544 2 4 0.000925133
Olea europaea chr3 2 CH_oeu_65 3 3 0.0000000854814
Papaver somniferum NW_020631041.1 2 CH_pso_242 3 4 0.000000106529
Papaver somniferum NC_039360.1 2 CH_pso_627 2 2 0.000472989
Trifolium pratense Tp57577_TGAC_v2_LG5 2 CH_tpr_362 2 2 0.000454184

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001