Functional clusters
Information
- Type MapMan
- Description Protein biosynthesis.mRNA quality control.NMD Nonsense-Mediated Decay.effector protein (SMG7)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Olea europaea | scaffold760 | 1 | CH_oeu_315 | 2 | 2 | 0.000320273 |
Tripterygium wilfordii | NC_052234.1 | 1 | CH_twi_254 | 2 | 2 | 0.000334504 |
Eucalyptus grandis | Chr03 | 2 | CH_egr_694 | 2 | 2 | 0.0000585274 |
Gossypium hirsutum | A07 | 2 | CH_ghi_910 | 2 | 2 | 0.000961256 |
Olea europaea | scaffold760 | 2 | CH_oeu_315 | 2 | 2 | 0.000320273 |
Tripterygium wilfordii | NC_052234.1 | 2 | CH_twi_254 | 2 | 2 | 0.000334504 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |