Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.mRNA quality control.NMD Nonsense-Mediated Decay.SMG1C protein kinase complex.kinase component SMG1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-8 1 CH_aar_147 2 2 0.0000912326
Corylus avellana 1 1 CH_cav_320 2 3 0.00023
Daucus carota DCARv2_Chr1 1 CH_dca_231 2 2 0.0000637775
Sequoiadendron giganteum chr2 1 CH_sgi_819 2 2 0.0000487151
Trochodendron aralioides group11 1 CH_tar_257 2 2 0.0000600366
Utricularia gibba unitig_0 1 CH_ugi_145 2 2 0.0000734592
Vanilla planifolia CM028155.1 1 CH_vpl_258 2 2 0.000221664
Aethionema arabicum LG-8 2 CH_aar_147 2 2 0.0000912326
Corylus avellana 1 2 CH_cav_320 2 3 0.00023
Daucus carota DCARv2_Chr1 2 CH_dca_231 2 2 0.0000637775
Sequoiadendron giganteum chr2 2 CH_sgi_819 2 2 0.0000487151
Trochodendron aralioides group11 2 CH_tar_257 2 2 0.0000600366
Utricularia gibba unitig_0 2 CH_ugi_145 2 2 0.0000734592
Vanilla planifolia CM028155.1 2 CH_vpl_258 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001