Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).peripheral components.component ACINUS

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata Contig372 1 CH_bca_890 2 3 0.000384766
Cucumis sativus L. scaffold78 1 CH_csa_254 2 2 0.000250428
Davidia involucrata GWHABJS00000011 1 CH_din_463 2 2 0.000500125
Lonicera japonica GWHAAZE00000002 1 CH_lonja_367 2 2 0.0000598874
Nicotiana tabacum Nitab4.5_0000214 1 CH_nta_97 2 2 0.000109727
Petunia axillaris Peaxi162Scf00168 1 CH_pax_191 2 2 0.0000703556
Physcomitrium patens Chr15 1 CH_ppa_147 2 2 0.000183818
Papaver somniferum NC_039363.1 1 CH_pso_571 2 2 0.000337849
Papaver somniferum NC_039358.1 1 CH_pso_572 2 2 0.000337849
Salix brachista GWHAAZH00000005 1 CH_sbr_277 2 3 0.000189042
Solanum lycopersicum SL4.0ch04 1 CH_sly_319 2 2 0.0000586941
Solanum pennellii Spenn-ch04 1 CH_spe_273 2 2 0.000044479
Solanum tuberosum ST4.03ch04 1 CH_stu_373 2 2 0.0000512453
Selenicereus undatus Scaffold_33679 1 CH_sun_114 2 2 0.0000726639
Brassica carinata Contig372 2 CH_bca_890 2 3 0.000384766
Cucumis sativus L. scaffold78 2 CH_csa_254 2 2 0.000250428
Davidia involucrata GWHABJS00000011 2 CH_din_463 2 2 0.000500125
Gossypium hirsutum A02 2 CH_ghi_681 2 2 0.000400523
Gossypium hirsutum D03 2 CH_ghi_682 2 2 0.000400523
Lonicera japonica GWHAAZE00000002 2 CH_lonja_367 2 2 0.0000598874
Nicotiana tabacum Nitab4.5_0000214 2 CH_nta_97 2 2 0.000109727
Petunia axillaris Peaxi162Scf00168 2 CH_pax_191 2 2 0.0000703556
Physcomitrium patens Chr15 2 CH_ppa_147 2 2 0.000183818
Papaver somniferum NC_039363.1 2 CH_pso_571 2 2 0.000337849
Papaver somniferum NC_039358.1 2 CH_pso_572 2 2 0.000337849
Salix brachista GWHAAZH00000005 2 CH_sbr_277 2 3 0.000189042
Solanum lycopersicum SL4.0ch04 2 CH_sly_319 2 2 0.0000586941
Solanum pennellii Spenn-ch04 2 CH_spe_273 2 2 0.000044479
Solanum tuberosum ST4.03ch04 2 CH_stu_373 2 2 0.0000512453
Selenicereus undatus Scaffold_33679 2 CH_sun_114 2 2 0.0000726639

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001