Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).peripheral components.component PYM

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB03 1 CH_bca_698 2 2 0.000128259
Lonicera japonica GWHAAZE00000005 1 CH_lonja_181 4 23 0.0000000285023
Magnolia biondii Chr03 1 CH_mbi_410 2 3 0.000145695
Sequoiadendron giganteum chr2 1 CH_sgi_818 2 2 0.0000487151
Brassica carinata ChrB03 2 CH_bca_698 2 2 0.000128259
Lonicera japonica GWHAAZE00000005 2 CH_lonja_181 4 23 0.0000000285023
Magnolia biondii Chr03 2 CH_mbi_410 2 3 0.000145695
Sequoiadendron giganteum chr2 2 CH_sgi_818 2 2 0.0000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001