Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 1 CH_amhyb_213 2 2 0.000252525
Aquilegia oxysepala CHR06 1 CH_aox_195 3 20 0.000109802
Chenopodium quinoa C_Quinoa_Scaffold_2689 1 CH_cqu_566 2 2 0.000710732
Capsella rubella scaffold_7 1 CH_cru_154 3 3 0.000000280668
Magnolia biondii Chr07 1 CH_mbi_218 3 7 0.00000123803
Petunia axillaris Peaxi162Scf00753 1 CH_pax_269 2 2 0.000211067
Sequoiadendron giganteum chr3 1 CH_sgi_1147 2 2 0.000146145
Trifolium pratense Tp57577_TGAC_v2_LG1 1 CH_tpr_332 2 2 0.000227092
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 2 CH_amhyb_213 2 2 0.000252525
Aquilegia oxysepala CHR06 2 CH_aox_195 3 20 0.000109802
Chenopodium quinoa C_Quinoa_Scaffold_2689 2 CH_cqu_566 2 2 0.000710732
Capsella rubella scaffold_7 2 CH_cru_154 3 3 0.000000280668
Magnolia biondii Chr07 2 CH_mbi_218 3 7 0.00000123803
Petunia axillaris Peaxi162Scf00753 2 CH_pax_269 2 2 0.000211067
Sequoiadendron giganteum chr3 2 CH_sgi_1147 2 2 0.000146145
Trifolium pratense Tp57577_TGAC_v2_LG1 2 CH_tpr_332 2 2 0.000227092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001