Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.aminoacyl-tRNA synthetase activities.asparagine-tRNA ligase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr8 1 CH_ccan_182 2 5 0.0000255534
Carya illinoinensis Chr13 1 CH_cil_541 2 2 0.000619828
Gossypium hirsutum A05 1 CH_ghi_338 3 3 0.00000164699
Helianthus annuus HanXRQChr01 1 CH_han_702 2 2 0.000579643
Nelumbo nucifera chr1 1 CH_nnu_445 2 2 0.000654022
Rhododendron simsii chr05 1 CH_rsi_123 4 9 0.00000000152315
Vanilla planifolia CM028156.1 1 CH_vpl_333 2 2 0.000443328
Coffea canephora chr8 2 CH_ccan_182 2 5 0.0000255534
Carya illinoinensis Chr13 2 CH_cil_541 2 2 0.000619828
Gossypium hirsutum A05 2 CH_ghi_338 3 3 0.00000164699
Helianthus annuus HanXRQChr01 2 CH_han_702 2 2 0.000579643
Nelumbo nucifera chr1 2 CH_nnu_445 2 2 0.000654022
Rhododendron simsii chr05 2 CH_rsi_123 4 9 0.00000000152315
Vanilla planifolia CM028156.1 2 CH_vpl_333 2 2 0.000443328

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001