Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Beta vulgaris Chr3_EL10_PGA_scaffold7 1 CH_bvu_284 2 3 0.000745074
Davidia involucrata GWHABJS00000001 1 CH_din_371 2 2 0.000150038
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_121 5 80 0.0000000406999
Punica granatum NC_045134.1 1 CH_pgr_294 2 2 0.000225107
Populus trichocarpa Chr18 1 CH_ptr_454 2 2 0.000346801
Quercus lobata 6 1 CH_qlo_403 3 3 0.0000000799683
Sequoiadendron giganteum chr4 1 CH_sgi_1403 2 3 0.000876823
Selaginella moellendorffii scaffold_105 1 CH_smo_176 2 2 0.000933707
Solanum pennellii Spenn-ch06 1 CH_spe_444 2 2 0.000266874
Trifolium pratense Tp57577_TGAC_v2_scaf_192 1 CH_tpr_260 2 2 0.0000756974
Beta vulgaris Chr3_EL10_PGA_scaffold7 2 CH_bvu_284 2 3 0.000745074
Davidia involucrata GWHABJS00000001 2 CH_din_371 2 2 0.000150038
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_121 5 80 0.0000000406999
Punica granatum NC_045134.1 2 CH_pgr_294 2 2 0.000225107
Populus trichocarpa Chr18 2 CH_ptr_454 2 2 0.000346801
Quercus lobata 6 2 CH_qlo_403 3 3 0.0000000799683
Sequoiadendron giganteum chr4 2 CH_sgi_1403 2 3 0.000876823
Selaginella moellendorffii scaffold_105 2 CH_smo_176 2 2 0.000933707
Solanum pennellii Spenn-ch06 2 CH_spe_444 2 2 0.000266874
Trifolium pratense Tp57577_TGAC_v2_scaf_192 2 CH_tpr_260 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001