Functional clusters
Information
- Type MapMan
- Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS6
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Camellia sinensis var. sinensis | Chr13 | 1 | CH_camsi_579 | 3 | 17 | 0.0000749702 |
Ceratophyllum demersum | 2 | 1 | CH_cde_55 | 3 | 6 | 0.00000374137 |
Lactuca sativa | Lsat_1_v8_lg_2 | 1 | CH_lsa_450 | 2 | 2 | 0.000308404 |
Physcomitrium patens | Chr15 | 1 | CH_ppa_64 | 3 | 13 | 0.0000160943 |
Papaver somniferum | NC_039358.1 | 1 | CH_pso_224 | 3 | 3 | 0.0000000639203 |
Quercus lobata | 12 | 1 | CH_qlo_884 | 2 | 2 | 0.000309773 |
Camellia sinensis var. sinensis | Chr13 | 2 | CH_camsi_579 | 3 | 17 | 0.0000749702 |
Ceratophyllum demersum | 2 | 2 | CH_cde_55 | 3 | 6 | 0.00000374137 |
Lactuca sativa | Lsat_1_v8_lg_2 | 2 | CH_lsa_450 | 2 | 2 | 0.000308404 |
Physcomitrium patens | Chr15 | 2 | CH_ppa_64 | 3 | 13 | 0.0000160943 |
Papaver somniferum | NC_039358.1 | 2 | CH_pso_224 | 3 | 3 | 0.0000000639203 |
Quercus lobata | 12 | 2 | CH_qlo_884 | 2 | 2 | 0.000309773 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |